\usepackage{SweaveSlides}
\title[lme4]{Using lme4: Mixed-Effects Modeling in R}
\subject{LMM}
\date[August 11, 2008]{UseR!2008\\August 11, 2008}
\AtBeginSection[]
{
  \begin{frame}<beamer>
    \frametitle{Outline}
    \tableofcontents[currentsection]
  \end{frame}
}
\begin{document}
\frame{\titlepage}
\begin{frame}
  \frametitle{Outline}
  \tableofcontents[pausesections,hideallsubsections]
\end{frame}

\begin{frame}
  \frametitle{Web sites associated with the workshop}
  \begin{description}
  \item[www.stat.wisc.edu/$\sim$bates/UseR2008] Materials for the course
  \item[www.R-project.org] Main web site for the R Project
  \item[cran.R-project.org] Comprehensive R Archive Network primary site
  \item[cran.us.R-project.org] Main U.S. mirror for CRAN
  \item[R-forge.R-project.org] R-Forge, development site for many
    public R packages.  This is also the URL of the repository for
    installing the development versions of the \code{lme4} and
    \code{Matrix} packages, if you are so inclined.
  \item[lme4.R-forge.R-project.org] development site for the \code{lme4} package
  \end{description}
\end{frame}

\section[Simple]{Organizing and plotting data; simple, scalar random effects}
\label{sec:data}
\include{Data}

\section[Longitudinal]{Models for longitudinal data}
\label{sec:longitudinal}
\include{Longitudinal}

\section[Interactions]{Interactions of grouping factors and other covariates}
\label{sec:Interactions}
\include{Interactions}

\section[Theory]{Evaluating the log-likelihood}
\label{sec:theory}
\include{theory}

\section[GLMM]{Generalized Linear Mixed Models}
\label{sec:ModelDef}
\include{ModelDef}

\section[Item Response]{Item Response Models as GLMMs}
\label{sec:ItemResponse}
\include{ItemResponse}

\section[NLMM]{ Nonlinear Mixed Models}
\label{sec:NLMM}
\include{NLMM}

\end{document}



