• 2/8/99: Numerical calculations in a simple mutant frequency example: Splus/R code and graph .
• 2/16/99: CD-4 example handout , and Splus/R code , with transition matrix .
• 2/16/99: Protein binding element example: some Splus/R code to simulate one protein .
• 2/25/99: Gibbs sampling for simple Ising model: some Splus/R code for one scan and output from one scan . Also, code for multiple scans. ;
• 2/25/99: Gibbs sampling for standard bivariate normal: some Splus/R code and output for rho = 0.8.
• 4/1/99: The Binomial(n, phi) problem. some Splus/R code and output .
• 4/8/99: NBA Free Throw Percentages:
  • Data from March 8, 1999
  • Code to plot percentages
  • Plot of percentages and attempts
  • Empirical Bayes analysis
  • Empirical Bayes ranking vs naive ranking
• 4/13/99: Cancer Mapping:
  • Code to simulate a cancer map.
  • Noisy map with sample size effects
  • Code to compute empirical Bayes estimates.
  • Empirical Bayes estimates