Rmarkdown Notes

• Reproducible Reports with Rmarkdown from Data Carpentry
• Rmarkdown from RStudio
• Rmarkdown Gallery & Rmarkdown Articles

• Rmarkdown Example

• Knitr in a knutshell by Karl Broman
• Rstudio Rmarkdown Cheatsheet (scroll down to find)
• Rmarkdown Code and Chunk Options
• http://rpubs.com (Share Rmarkdown online)
• https://plot.ly/r/knitr/

• MacTex Download (for PDFs on Macintosh)

Adding pandoc to your path in .bash_profile or .bashrc

# Adding pandoc from R studio to path
export PATH=$PATH:/Applications/RStudio.app/Contents/MacOS/pandoc