Ecoli.oddsplot {Ecoli} | R Documentation |
data(Ecoli)
Odds plot analysis of E. coli microarray data using Bayesian Gamma-Gamma-Bernoulli model.
Craig Richmond
MA Newton, CM Kendziorski, CS Richmond, FR Blattner and KW Tsui (2000) ``On differential variability of expression ratios: improving statistical inference about gene expression changes from microarray data,'' J Computational Biology 00: 000-000.
library( pickgene ) library( Ecoli ) par( mfrow = c(2,2) ) data( Ecoli.control ) do.oddsplot( Ecoli.control, "Control", rotate = F, theta = c(22.9048,0.9438,0.2847,0.0030) ) data( Ecoli.HS ) do.oddsplot( Ecoli.HS, "Heat Shock", rotate = F, theta = c(2.7528,1.3661,4.1240,0.0515) ) data( Ecoli.IPTGa ) do.oddsplot( Ecoli.IPTGa, "IPTG-a", rotate = F, theta = c(12.5348,0.8163,0.3707,0.0069) ) data( Ecoli.IPTGb ) do.oddsplot( Ecoli.IPTGb, "IPTG-b", rotate = F, theta = c(9.6886,0.6786,0.2844,0.0036) )