From crittend@itis.com Fri Nov 8 08:39:51 1996 Date: Fri, 08 Nov 1996 08:31:28 -0500 From: Lyman / Margaret Crittenden To: AnGenMap Subject: Mapping References November 1996 [ Part 2: "Attached Text" ] JOURNAL REFS. (MAPPING METHODS AND REVIEWS) NLM 11/96 1. Atwood, L. D.; Mitchell, B. D.; Stowell, N. C. Segregation and linkage analysis of the complex trait Q1. Genet Epidemiol. 12:713-8, 1995. Department of Genetics, Southwest Foundation for Biomedical Research, San Antonio, TX 78228-0147, USA. 2. Bailey, J. N.; Almasy, L. A brute force dichotomization approach to quantitative trait linkage analysis. Genet Epidemiol. 12:719-22, 1995. Department of Epidemiology and Public Health, Yale University School of Medicine, New Haven, CT 06510, USA. 3. Bailey-Wilson, J. E.; Sorant, B.; Sorant, A. J.; Paul, C. M.; Elston, R. C. Model-free association analysis of a rare disease. Genet Epidemiol. 12:571-5, 1995. Department of Biometry and Genetics, Louisiana State University Medical Center, New Orleans, USA. 4. Blangero, J. Genetic analysis of a common oligogenic trait with quantitative correlates: summary of GAW9 results. Genet Epidemiol. 12:689-706, 1995. Department of Genetics, Southwest Foundation for Biomedical Research, San Antonio, TX 78228-0147, USA. 5. Borecki, I. B.; Vogler, G. P. Interval mapping of quantitative trait loci using a sib-pair linkage method. Genet Epidemiol. 12:723-8, 1995. Division of Biostatistics, Washington University School of Medicine, St Louis, MO 63110, USA. 6. Cantor, R. M. A genetic analysis of common disease data. Genet Epidemiol. 12:735-9, 1995. Division of Medical Genetics, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA. 7. Cheverud, J. M.; Routman, E. J.; Duarte, F. A.; van Swinderen, B.; Cothran, K.; Perel, C. Quantitative trait loci for murine growth. Genetics. 142:1305-19, 1996 Apr. Department of Anatomy and Neurobiology, Washington University School of Medicine, St. Louis, Missouri 63110, USA. cheverud@thalamus.wustl.edu. 8. Clerget-Darpoux, F.; Babron, M. C.; Bickeboller, H. Comparing the power of linkage detection by the transmission disequilibrium test and the identity-by-descent test. Genet Epidemiol. 12:583-8, 1995. INSERM U155, Paris, France. 9. Dizier, M. H.; Babron, M. C.; Clerget-Darpoux, F. Modeling the role of two susceptibility loci by the MASC method. Genet Epidemiol. 12:589-93, 1995. INSERM U155, Paris, France. 10. Doerge, R. W.; Churchill, G. A. Permutation tests for multiple loci affecting a quantitative character. Genetics. 142:285-94, 1996 Jan. Biometrics Unit, Cornell University, Ithaca, New York 14853, USA. doerge@stat.purdue.edu. 11. Encyclopedia of the mouse genome V. December 1995. Mamm Genome. 6 Spec No:S1-352, 1996. 12. Eppig, J. T.; Nadeau, J. H. Comparative maps: the mammalian jigsaw puzzle. Curr Opin Genet Dev. 5:709-16, 1995 Dec. Jackson Laboratory, Bar Harbor, ME 04609, USA. jte@informatics.jax.org. 13. Falk, C. T.; Ashley, A.; Lamb, N.; Sherman, S. L. Identification of susceptibility loci contributing to a complex disease using conventional segregation, linkage, and association methods. Genet Epidemiol. 12:601-6, 1995. Laboratory of Population Genetics, New York Blood Center, NY 10021, USA. 14. Fisch, R. D.; Ragot, M.; Gay, G. A generalization of the mixture model in the mapping of quantitative trait loci for progeny from a biparental cross of inbred lines. Genetics. 143:571-7, 1996 May. Mathematical Applications Division, Ciba-Geigy AG, Basel, Switzerland. wrfi@chbs.ciba.com. 15. Fronicke, L.; Chowdhary, B. P.; Scherthan, H.; Gustavsson, I. A comparative map of the porcine and human genomes demonstrates ZOO-FISH and gene mapping-based chromosomal homologies. Mamm Genome. 7:285-90, 1996 Apr. Division of Human Biology and Human Genetics, University of Kaiserslautern, Erwin-Schroedingerstr., D-67663 Kaiserslautern, Germany. 16. Gauderman, W. J.; Witte, J. S.; Faucett, C. L.; Morrison, J.; Thomas, D. C. Genetic epidemiologic analysis of quantitative phenotypes using Gibbs sampling. Genet Epidemiol. 12:753-8, 1995. Department of Preventive Medicine, University of Southern California, Los Angeles 90033, USA. 17. Goldin, L. R.; Chase, G. A.; King, T. M.; Badner, J. A.; Gershon, E. S. Use of exact and adjusted liability scores to detect genes affecting common traits. Genet Epidemiol. 12:765-9, 1995. Clinical Neurogenetics Branch, NIMH, Bethesda, Maryland 20814-1274, USA. 18. Guo, S. W. Detection of genome similarity as an exploratory tool for mapping complex traits. Genet Epidemiol. 12:877-82, 1995. Department of Biostatistics, University of Michigan, Ann Arbor 48109-2029, USA. 19. Hodge, S. E. Genetic analysis workshop 9: development of problem 1. Genet Epidemiol. 12:555-60, 1995. Columbia University and New York State Psychiatric Institute, NY 10032, USA. 20. Hodge, S. E. An oliogenic disease displaying weak marker associations: a summary of contributions to problem 1 of GAW9. Genet Epidemiol. 12:545-54, 1995. Division of Clinical and Genetic Epidemiology, New York State Psychiatric Institute, NY 10032, USA. 21. Holmans, P.; McGuffin, P.; Clayton, D. Genome scan for association and linkage. Genet Epidemiol. 12:613-8, 1995. Department of Psychological Medicine, University of Wales College of Medicine, Cardiff, U.K. 22. Jansen, R. C. A general Monte Carlo method for mapping multiple quantitative trait loci. Genetics. 142:305-11, 1996 Jan. Centre for Plant Breeding and Reproduction Research, Wageningen, The Netherlands. r.c.jansen@cpro.dlo.nl. 23. Johnson, S. L.; Gates, M. A.; Johnson, M.; Talbot, W. S.; Horne, S.; Baik, K.; Rude, S.; Wong, J. R.; Postlethwait, J. H. Centromere-linkage analysis and consolidation of the zebrafish genetic map. Genetics. 142:1277-88, 1996 Apr. Institute of Neuroscience, University of Oregon, Eugene 97403, USA. sjohnson@uoneuro.uoregon.edu. 24. Kahn, E.; Hotmar, J.; Bernheim, A. Three-dimensional fluorescence in situ hybridization. Chromosomal studies on nuclei from cytogenetic preparations by confocal microscopy. Anal Quant Cytol Histol. 18:109-14, 1996 Apr. Institut National de la Sante et de la Recherche Medicale U.66, Institut Gustave Roussy, Villejuif, France. 25. Kapke, P.; Wang, L.; Helm, J.; Rothschild, M. F. Integration of the PiGMaP and USDA maps for porcine chromosome 14. Anim Genet. 27:187-90, 1996 Jun. Department of Animal Sciences, Iowa State University, Ames 50011, USA. 26. Keele, J. W.; Wray, J. E.; Behrens, D. W.; Rohrer, G. A.; Sunden, S. L.; Kappes, S. M.; Bishop, M. D.; Stone, R. T.; Alexander, L. J.; Beattie, C. W. A conceptual database model for genomic research. J Comput Biol. 1:65-76, 1994 Spring. U.S. Department of Agriculture, Roman L. Hruska U.S. Meat Animal Research Center (MARC), Clay Center, NE 68933-0166, USA. 27. Keightley, P. D.; Hardge, T.; May, L.; Bulfield, G. A genetic map of quantitative trait loci for body weight in the mouse. Genetics. 142:227-35, 1996 Jan. Institute of Cell, Animal and Population Biology, University of Edinburgh, Scotland. p.keightley@edinburgh.ac.uk. 28. King, T. M.; Zhu, D.; Amos, C. I. Association and linkage with quantitative traits. Genet Epidemiol. 12:771-5, 1995. Department of Epidemiology, University of Texas M.D. Anderson Cancer Center, Houston 77030, USA. 29. Knapp, M.; Durner, M.; Baur, M. P. Screening for linkage and association in nuclear families. Genet Epidemiol. 12:619-23, 1995. Institute for Medical Statistics, University of Bonn, Germany. 30. Korczak, J. F.; Pugh, E. W.; Premkumar, S.; Guo, X.; Elston, R. C.; Bailey-Wilson, J. E. Effects of marker information on sib-pair linkage analysis of a rare disease. Genet Epidemiol. 12:625-30, 1995. Department of Biometry and Genetics, Louisiana State University Medical Center, New Orleans, USA. 31. Lewis, C. M.; Goldgar, D. E. Screening for linkage using a multipoint identity-by-descent method. Genet Epidemiol. 12:777-82, 1995. Department of Medical Informatics, University of Utah, Salt Lake City 84108, USA. 32. Liu, S. C.; Kowalski, S. P.; Lan, T. H.; Feldmann, K. A.; Paterson, A. H. Genome-wide high-resolution mapping by recurrent intermating using Arabidopsis thaliana as a model. Genetics. 142:247-58, 1996 Jan. Department of Soil and Crop Sciences, Texas A&M University, College Station 77843-2474, USA. 33. Martinez, M.; Abel, L.; Demenais, F. How can maximum likelihood methods reveal candidate gene effects on a quantitative trait? Genet Epidemiol. 12:789-94, 1995. INSERM U155, Paris, France. 34. Matise, T. C. Genome scanning for complex disease genes using the transmission/disequilibrium test and haplotype-based haplotype relative risk. Genet Epidemiol. 12:641-5, 1995. Department of Psychiatry, Columbia University, New York, NY 10032, USA. 35. Mitchell, B. D.; Atwood, L. D.; Reinhart, L. The influence of response bias on segregation and linkage analysis. Genet Epidemiol. 12:795-9, 1995. Department of Genetics, Southwest Foundation for Biomedical Research, San Antonio, TX 78228-0147, USA. 36. Mitchell, L. E. Sequential analysis of marker data for a rare oligogenic disease. Genet Epidemiol. 12:647-51, 1995. Department of Community Health, Saint Louis University School of Public Health, MO 63108-3342, USA. 37. Moldin, S. O.; Van Eerdewegh, P. Multivariate genetic analysis of an oligogenic disease. Genet Epidemiol. 12:801-6, 1995. Department of Psychiatry, Washington University School of Medicine, St. Louis, Missouri 63110, USA. 38. Nejati-Javaremi, A.; Smith, C. Assigning linkage haplotypes from parent and progeny genotypes. Genetics. 142:1363-7, 1996 Apr. Department of Animal and Poultry Science, University of Guelph, Ontario, Canada. 39. Nemesure, B. B.; He, Q.; Mendell, N. Integration of linkage analyses and disease association studies. Genet Epidemiol. 12:653-8, 1995. Department of Preventive Medicine, State University of New York at Stony Brook 11794, USA. 40. Rice, J. P.; Neuman, R. J.; Hoshaw, S. L.; Daw, E. W.; Gu, C. TDT with covariates and genomic screens with mod scores: their behavior on simulated data. Genet Epidemiol. 12:659-64, 1995. Department of Psychiatry, Washington University School of Medicine, St. Louis, Missouri 63110, USA. 41. Risch, N.; Merikangas, K. The future of genetic studies of complex human diseases. Science. 273:1516-7, 1996 Sep 13. Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305-5120, USA. 42. Rogatko, A. Risk prediction with linked markers: theory. Am J Med Genet. 59:14-23, 1995 Oct 23. Fox Chase Cancer Center, Philadelphia, Pennsylvania 19111, USA. 43. Rogatko, A.; Rebbeck, T.; Zacks, S. Risk prediction with linked markers: pedigree analysis. Am J Med Genet. 59:24-32, 1995 Oct 23. Fox Chase Cancer Center, Philadelphia, PA 19111, USA. 44. Rohrer, G. A.; Behrens, D. W.; Keele, J. W. A simplified procedure for entry of raw genotypic data. J Comput Biol. 1:111-9, 1994 Summer. USDA, ARS, Roman L. Hruska U.S. Meat Animal Research Center, Clay Center, NE 68933-0166, USA. 45. Shugart, Y. Y. Precision of marker heterozygosity estimates. Genet Epidemiol. 12:671-4, 1995. Department of Genetics and Development, Columbia University, New York, NY 10032, USA. 46. Suarez, B. K.; Hampe, C. L.; O'Rourke, D.; Van Eerdewegh, P.; Reich, T. Sib-based detection of QTLs. Genet Epidemiol. 12:675-80, 1995. Department of Psychiatry, Washington University School of Medicine, St. Louis, MO 63110, USA. 47. Viville, S.; Mantovani, R. S1 mapping using single-stranded DNA probes. Methods Mol Biol. 58:147-53, 1996. Faculte de Medecine, DOI/LGME, Strasbourg, France. 48. Ward, P. J.; Bonaiti-Pellie, C. Measuring gene-disease association using a general pair method. Genet Epidemiol. 12:681-6, 1995. INSERM U351, Institut Gustave-Roussy, Villejuif, France. 49. Womack, J. E.; Kata, S. R. Bovine genome mapping: evolutionary inference and the power of comparative genomics. Curr Opin Genet Dev. 5:725-33, 1995 Dec. Department of Veterinary Pathobiology, Texas A&M University, College Station,. 50. Xiong, M.; Chen, H. J.; Prade, R. A.; Wang, Y.; Griffith, J.; Timberlake, W. E.; Arnold, J. On the consistency of a physical mapping method to reconstruct a chromosome in vitro. Genetics. 142:267-84, 1996 Jan. Department of Mathematics and Molecular Biology, University of Southern California, Los Angeles 90089, USA. 51. Xu, J.; Taylor, E. W.; Panhuysen, C. I.; Prenger, V. L.; Koskela, R.; Kiemeney, B.; LaBuda, M. C.; Maestri, N. E.; Meyers, D. A. Two-locus approach of segregation and linkage analysis in the study of complex traits. Genet Epidemiol. 12:825-30, 1995. Johns Hopkins Medical Institutions, Baltimore, Maryland, USA. 52. Yung, J. F. New FISH probes--the end in sight [news]. Nat Genet. 14:10-2, 1996 Sep. 53. Zhao, H.; Speed, T. P. On genetic map functions. Genetics. 142:1369-77, 1996 Apr. Department of Biostatistics, University of California, Los Angeles 90024, USA. ^Z [ Part 3: "Attached Text" ] ********************************************************************* Lyman B. Crittenden Phone: 608-251-1676 Margaret H. Crittenden 634 Emerson St., Madison, WI 53715 e-mail: crittend@itis.com ********************************************************************