From crittend@itis.com Wed Dec 15 10:52:14 1999 Date: Fri, 10 Dec 1999 16:38:31 -0600 (CST) From: Lyman / Margaret Crittenden To: Multiple Recipients of Subject: December, 1999 Mapping References Resent-Date: Fri, 10 Dec 1999 16:38:31 -0600 (CST) Resent-From: angenmap@genome.ansci.iastate.edu ************************************************************************* AnGenMap Discussion Mailing List | Mail distributed to >600 members http://www.genome.iastate.edu/community/discuss.html ************************************************************************* Holiday Greetings! JOURNAL REFS. (MAPING METHODS AND REVIEWS) 12/99 NLM 1. =09 Complete sequence and gene map of a human major histocompatibility complex. The MHC sequencing consortium [see comments]. Nature. 401:921-3, 1999. Medline UID: 20019336 2. Abreu, P. C.; Greenberg, D. A.Hodge, S. E. Direct power comparisons between simple LOD scores and NPL scores for linkage analysis in complex diseases. Am J Hum Genet. 65:847-57, 1999. ADDRESS: Division of Biostatistics, School of Public Health, Columbia University, N.Y., USA. Medline UID: 99375037 3. Adhami, F.; Muller, S.Hauser, M. T. Nonradioactive labeling of large DNA fragments for genome walking, RFLP and northern blot analysis. Biotechniques. 27:314-20, 1999. ADDRESS: University of Agricultural Sciences, Vienna, Austria. Medline UID: 99386288 4. Bois, P. and Jeffreys, A. J. Minisatellite instability and germline mutation. Cell Mol Life Sci. 55:1636-48, 1999. ADDRESS: Department of Genetics, University of Leicester, UK. Medline UID: 99455499 5. Boulay, J. L.; Reuter, J.; Ritschard, R.; Terracciano, L.; Herrmann, R.Rochlitz, C. Gene dosage by quantitative real-time PCR. Biotechniques. 27:228-30, 232, 1999. ADDRESS: Department of Research, University Hospital of Basel, Switzerland. boulay@ubaclu.unibas.ch. Medline UID: 99386270 6. Burland, T. G. DNASTAR's Lasergene sequence analysis software. Methods Mol Biol. 132:71-91, 2000. ADDRESS: DNASTAR, Madison, WI, USA. Medline UID: 20015555 7. Goldin, L. R.; Chase, G. A.Wilson, A. F. Regional inference with averaged P values increases the power to detect= linkage. Genet Epidemiol. 17:157-64, 1999. ADDRESS: Genetic Epidemiology Branch, Division of Cancer Epidemiology and Genetics, National Cancer Institute, NIH, Bethesda, Maryland 20892- 7236, USA. goldinl@exchange.nih.gov. Medline UID: 99376867 8. Gomez-Raya, L. and Klemetsdal, G. Two-stage selection strategies utilizing marker-quantitative trait locus information and individual performance. J Anim Sci. 77:2008-18, 1999. ADDRESS: Department of Animal Science, Agricultural University of Norway,= As. Medline UID: 99389071 9. Haberl, M. and Tautz, D. Comparative allele sizing can produce inaccurate allele size differences for microsatellites. Mol Ecol. 8:1347-9, 1999. ADDRESS: Zoologisches Institut, Universitat Munchen, Munchen, Germany. haberl@mailer.uni-marburg.de. Medline UID: 99376753 10. Holloway, J. W.; Beghe, B.; Turner, S.; Hinks, L. J.; Day, I. N.Howell, W. M. Comparison of three methods for single nucleotide polymorphism typing for DNA bank studies: sequence-specific oligonucleotide probe hybridisation, TaqMan liquid phase hybridisation, and microplate array diagonal gel electrophoresis (MADGE). Hum Mutat. 14:340-7, 1999. ADDRESS: Human Genetics Research Division, University of Southampton, Southampton General Hospital, Southampton, UK. J.W.Holloway@soton.ac.uk. Medline UID: 99433975 11. Jensen, C. S. and Kong, A. Blocking Gibbs sampling for linkage analysis in large pedigrees with many= loops. Am J Hum Genet. 65:885-901, 1999. ADDRESS: Department of Mathematics and Computer Science, Institute for Electronic Systems, Aalborg University, Aalborg, Denmark. claus@cs. auc.dk. Medline UID: 99375040 12. Kuklin, A.; Munson, K.; Gjerde, D.; Haefele, R.Taylor, P. Detection of single-nucleotide polymorphisms with the WAVE DNA fragment analysis system. Genet Test. 1:201-6, 1997-1998. ADDRESS: Transgenomic, Inc., San Jose, CA 95131, USA. Medline UID: 99393912 13. Li Vigni, R.; Bianchi, U. A.; Carosi, G.; Lomini, M.; Falchetti, M.; Callea, F.Pecorelli, S. Successful application of indirect in-situ polymerase chain reaction to tissues fixed in Bouin's solution. Histopathology. 35:134-43, 1999. ADDRESS: Department of Obstetrics and Gynaecology, University of Brescia,= Italy. Medline UID: 99390249 14. Lohse, J.; Dahl, O.Nielsen, P. E. Double duplex invasion by peptide nucleic acid: a general principle for sequence-specific targeting of double-stranded DNA. Proc Natl Acad Sci U S A. 96:11804-8, 1999. ADDRESS: Center for Biomolecular Recognition, Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen O,= Denmark. Medline UID: 99449763 15. Mahairas, G. G.; Wallace, J. C.; Smith, K.; Swartzell, S.; Holzman, T.; Keller, A.; Shaker, R.; Furlong, J.; Young, J.; Zhao, S.; Adams, M. D.Hood, L. Sequence-tagged connectors: a sequence approach to mapping and scanning the human genome. Proc Natl Acad Sci U S A. 96:9739-44, 1999. ADDRESS: University of Washington High-Throughput Sequencing Center, 401 Queen Anne Avenue North, Seattle, WA 98109, USA. Medline UID: 99380589 16. McPeek, M. S. and Strahs, A. Assessment of linkage disequilibrium by the decay of haplotype sharing, with application to fine-scale genetic mapping. Am J Hum Genet. 65:858-75, 1999. ADDRESS: Department of Statistics, University of Chicago, Chicago, IL 60637, USA. mcpeek@galton.uchicago.edu. Medline UID: 99375038 17. O'Brien, S. J.; Eisenberg, J. F.; Miyamoto, M.; Hedges, S. B.; Kumar, S.; Wilson, D. E.; Menotti-Raymond, M.; Murphy, W. J.; Nash, W. G.; Lyons, L. A.; Menninger, J. C.; Stanyon, R.; Wienberg, J.; Copeland, N. G.; Jenkins, N. A.; Gellin, J.; Yerle, M.; Andersson, L.; Womack, J.; Broad, T.; Postlewait, J.; Serov, O.; Bailey, E.; James, M. R.; Marshall Graves, J. A.^=7Fy=80=7F=062. Genome maps 10. Comparative genomics. Mammalian radiations. Wall chart. Science. 286:463-78, 1999. ADDRESS: National Cancer Institute, Frederick, MD, USA. Medline UID: 20021262 18. O'Brien, S. J.; Menotti-Raymond, M.; Murphy, W. J.; Nash, W. G.; Wienberg, J.; Stanyon, R.; Copeland, N. G.; Jenkins, N. A.; Womack, J. E.Marshall Graves, J. A. The promise of comparative genomics in mammals. Science. 286:458-62; 479-81, 1999. ADDRESS: Laboratory of Genomic Diversity, National Cancer Institute, Frederick, MD 21702-1201, USA. Medline UID: 99453137 19. Qu, Y.; Whetsell, L.Carpenter, N. J. Technical pitfalls encountered in PCR quantification using microsatellites. Genet Test. 1:213-5, 1997-1998. ADDRESS: H.A. Chapman Institute of Medical Genetics, Tulsa, OK 74135, USA. Medline UID: 99393914 20. Rex, M. and Scotting, P. J. In situ hybridization to sections (nonradioactive). Methods Mol Biol. 97:645-53, 1999. ADDRESS: Department of Genetics, University of Notingham, UK. Medline UID: 99372346 21. Schermelleh, L.; Thalhammer, S.; Heckl, W.; Posl, H.; Cremer, T.; Schutze, K.Cremer, M. Laser microdissection and laser pressure catapulting for the generation of chromosome-specific paint probes. Biotechniques. 27:362-7, 1999. ADDRESS: Ludwig Maximilians Universitat, Munich, Germany. Medline UID: 99386295 22. Speel, E. J. Robert Feulgen Prize Lecture 1999. Detection and amplification systems for sensitive, multiple-target DNA and RNA in situ hybridization: looking inside cells with a spectrum of colors. Histochem Cell Biol. 112:89-113, 1999. ADDRESS: Department of Pathology, University of Zurich, Schmelzbergstrasse 12, CH-8091 Zurich, Switzerland, ernst-jan.speel@pty.usz.ch. Medline UID: 99389975 23. Staden, R.; Beal, K. F.Bonfield, J. K. The Staden package, 1998. Methods Mol Biol. 132:115-30, 2000. ADDRESS: MRC Laboratory of Molecular Biology, Cambridge, UK. Medline UID: 20015557 24. Wei, K.; Wei, S.; Moralejo, D. H.; Yamada, T.; Ogino, T.Matsumoto, K. An efficient multiplex PCR suitable for large scale typing in linkage= mapping. J Vet Med Sci. 61:849-51, 1999. ADDRESS: Institute for Animal Experimentation, University of Tokushima School of Medicine, Japan. Medline UID: 99385295 25. Weimer, J.; Kiechle, M.; Senger, G.; Wiedemann, U.; Ovens-Raeder, A.; Schuierer, S.; Kautza, M.; Siebert, R.Arnold, N. An easy and reliable procedure of microdissection technique for the analysis of chromosomal breakpoints and marker chromosomes. Chromosome Res. 7:355-62, 1999. ADDRESS: Universitats-Frauenklinik, Christian-Albrechts Universitat Kiel, Germany. Joerg.Weimer@t-online.de. Medline UID: 99443233 ********************************************************************* Lyman B. Crittenden Phone: 608-798-0791 Margaret H. Crittenden 8550 Highway 19, Cross Plains WI 53528-9300, USA e-mail: crittend@itis.com ********************************************************************* +--------------------------------------+--------------------------------+ | U.S. PIG GENOME COORDINATION PROJECT | Paid for by funds from the | | WEB: http://www.genome.iastate.edu | NRSP8 USDA /CSREES sponsored | | LIST: angenmap@db.genome.iastate.edu | PigGenome Coordination Program | +--------------------------------------+--------------------------------+