From crittend@itis.com Mon Aug 28 09:12:39 2000 Date: Sat, 26 Aug 2000 11:46:22 -0500 From: Lyman/Margaret Crittenden To: Multiple Recipients of Subject: August, 2000 Mapping References Resent-Date: 26 Aug 2000 16:51:02 -0000 Resent-From: angenmap@genome.ansci.iastate.edu Resent-cc: recipient list not shown: ; [ AnGenMap Discussion Mailing List - Mail distributed to 729 members ] [ INFO: http://www.genome.iastate.edu/community/discuss.html ] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ JOURNAL REFS. (MAPPING METHODS AND REVIEWS) NLM 8/00 1. Boddeker, I. and Ziegler, A. [Association and linkage studies for the analysis of candidate genes]. Dtsch Med Wochenschr. 125:810-5, 2000. ADDRESS: Institut fur Medizinische Biometrie und Epidemiologie, Philipps-Universitat Marburg. Medline UID: 20373211 2. Boehnke, M. A look at linkage disequilibrium [news; comment]. Nat Genet. 25:246-7, 2000. Medline UID: 20347698 3. Cervino, A. C. and Hill, A. V. Comparison of tests for association and linkage in incomplete families. Am J Hum Genet. 67:120-32, 2000. ADDRESS: The Wellcome Trust Centre for Human Genetics, University of Oxford, United Kingdom. sandra@well.ox.ac.uk. Medline UID: 20307184 4. Cordell, H. J. and Olson, J. M. Correcting for ascertainment bias of relative-risk estimates obtained using affected-sib-pair linkage data. Genet Epidemiol. 18:307-21, 2000. ADDRESS: Department of Epidemiology and Biostatistics, Rammelkamp Center for Education and Research, MetroHealth Campus, Case Western Reserve University, Cleveland, Ohio 44109, USA. cordell@darwin.cwru.edu. Medline UID: 20259375 5. Deng, H. W. and Chen, W. M. QTL fine mapping, in extreme samples of finite populations, for complex traits with familial correlation due to polygenes [letter].67:259-62, 2000. Medline UID: 20307203 6. Ellis, L. A.; Taylor, C. F.Taylor, G. R. A comparison of fluorescent SSCP and denaturing HPLC for high throughput mutation scanning. Hum Mutat. 15:556-64, 2000. ADDRESS: Yorkshire Regional DNA Laboratory, St James's University Hospital, Leeds, United Kingdom. Medline UID: 20320708 7. Ezzell, C. Beyond the human genome. Sci Am. 283:64-9, 2000. Medline UID: 20338219 8. Fei, Z. and Smith, L. M. Analysis of single nucleotide polymorphisms by primer extension and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Rapid Commun Mass Spectrom. 14:950-9, 2000. ADDRESS: Department of Chemistry, University of Wisconsin, Madison, WI 53706-1396, USA. Medline UID: 20304514 9. George, A. W.; Mengersen, K. L.Davis, G. P. Localization of a quantitative trait locus via a Bayesian approach. Biometrics. 56:40-51, 2000. ADDRESS: School of Mathematics, Queensland University of Technology, Brisbane, Australia. andrew.george@bbsrc.ac.uk. Medline UID: 20246205 10. Gong, B. and Ge, R. Using the SMART cDNA system to map the transcription initiation site. Biotechniques. 28:846-8, 850, 852, 2000. ADDRESS: Department of Biological Sciences, Faculty of Science, National University of Singapore, Singapore. Medline UID: 20278628 11. Hsu, S. Y. and Hsueh, A. J. Discovering new hormones, receptors, and signaling mediators in the genomic era. Mol Endocrinol. 14:594-604, 2000. ADDRESS: Department of Gynecology and Obstetrics, Stanford University School of Medicine, California 94305-5317, USA. Medline UID: 20267222 12. Jackson, P. E.; Scholl, P. F.Groopman, J. D. Mass spectrometry for genotyping: an emerging tool for molecular medicine. Mol Med Today. 6:271-6, 2000. ADDRESS: Department of Environmental Health Sciences, Johns Hopkins University, Baltimore, MD 21205, USA. pjackson@jhsph.edu. Medline UID: 20319146 13. Johnson, G. C. and Todd, J. A. Strategies in complex disease mapping. Curr Opin Genet Dev. 10:330-4, 2000. ADDRESS: Department of Medical Genetics, Wellcome Trust/MRC Building, University of Cambridge, Wellcome Trust Centre for Molecular Mechanisms of Disease, Addenbrookes Hospital, Cambridge, CB2 2XY, UK. Medline UID: 20286429 14. Kilstrup, M. and Kristiansen, K. N. Rapid genome walking: a simplified oligo-cassette mediated polymerase chain reaction using a single genome-specific primer. Nucleic Acids Res. 28:E55, 2000. Medline UID: 20330643 15. Kitada, K.; Voigt, B.; Kondo, Y.Serikawa, T. An integrated rat genome map based on genetic and cytogenetic data. Exp Anim. 49:119-26, 2000. ADDRESS: Institute of Laboratory Animals, Graduate School of Medicine, Kyoto University, Japan. Medline UID: 20348426 16. Leamon, J. H.; Moiseff, A.Crivello, J. F. Development of a high-throughput process for detection and screening of genetic polymorphisms. Biotechniques. 28:994-6, 998, 1000 passim, 2000. ADDRESS: Department of Physiology and Neurobiology, University of Connecticut, Storrs 06269, USA. Medline UID: 20278648 17. Martin, E. R.; Monks, S. A.; Warren, L. L.Kaplan, N. L. A test for linkage and association in general pedigrees: the pedigree disequilibrium test. Am J Hum Genet. 67:146-54, 2000. ADDRESS: Center for Human Genetics, Department of Medicine, Duke University Medical Center, Durham, NC 27710, USA. emartin@chg.mc.duke.edu. Medline UID: 20307186 18. Meuwissen, T. H. and Goddard, M. E. Fine mapping of quantitative trait loci using linkage disequilibria with closely linked marker loci. Genetics. 155:421-30, 2000. ADDRESS: Research Institute of Animal Science and Health, Box 65, 8200 AB Lelystad, The Netherlands. t.h.e.meuwissen@id.dlo.nl. Medline UID: 20253123 19. Morris, A. P.; Whittaker, J. C.Balding, D. J. Bayesian fine-scale mapping of disease loci, by hidden Markov models. Am J Hum Genet. 67:155-69, 2000. ADDRESS: Department of Applied Statistics, University of Reading, United Kingdom. sns98am@reading.ac.uk. Medline UID: 20307187 20. O'Dell, S. D.; Chen, X.Day, I. N. Higher resolution microplate array diagonal gel electrophoresis: application to a multiallelic minisatellite. Hum Mutat. 15:565-76, 2000. ADDRESS: Human Genetics Research Division, Southampton University School of Medicine, Southampton General Hospital, Southampton, United Kingdom. S.D.O'Dell@soton.ac.uk. Medline UID: 20320709 21. O'Hanlon, P. C. and Peakall, R. A simple method for the detection of size homoplasy among amplified fragment length polymorphism fragments. Mol Ecol. 9:815-6, 2000. ADDRESS: Division of Botany and Zoology, The Australian National University, Canberra, ACT 0200, Australia. peter.ohanlon@anu.edu.au. Medline UID: 20307523 22. Perez-Enciso, M. and Varona, L. Quantitative trait loci mapping in F(2) crosses between outbred lines. Genetics. 155:391-405, 2000. ADDRESS: Centre UdL-IRTA, Area de Produccio Animal, 25198 Lleida, Spain. mperez@toulouse.inra.fr. Medline UID: 20253121 23. Plyler, T. R. and Vallejos, C. E. Method for cloning restriction fragments containing the termini of BAC inserts. Biotechniques. 28:1012-6, 1018, 2000. ADDRESS: Department of Horticultural Sciences, University of Florida, Gainesville 32611-0690, USA. Medline UID: 20278650 24. Pritchard, J. K.; Stephens, M.; Rosenberg, N. A.Donnelly, P. Association mapping in structured populations. Am J Hum Genet. 67:170-81, 2000. ADDRESS: Department of Statistics, University of Oxford, United Kingdom. pritch@stats.ox.ac.uk. Medline UID: 20307188 25. Siegmund, K. D.; Langholz, B.; Kraft, P.Thomas, D. C. Testing linkage disequilibrium in sibships. Am J Hum Genet. 67:244-8, 2000. ADDRESS: Department of Preventive Medicine, University of Southern California, Los Angeles, CA 90089, USA. kims@usc.edu. Medline UID: 20307197 26. Sprunger, L. and Hunter, K. The 13th Annual International Mammalian Genome Society Conference: a meeting report. Mamm Genome. 11:413-6, 2000. ADDRESS: Department of Genetics, University of Michigan, 2806 Med Sci II, Ann Arbor, Michigan 48375, USA. Medline UID: 20375839 27. Sun, X.; Ding, H.; Hung, K.Guo, B. A new MALDI-TOF based mini-sequencing assay for genotyping of SNPS. Nucleic Acids Res. 28:E68, 2000. ADDRESS: Department of Chemistry, Cleveland State University, Cleveland, OH 44115, USA. Medline UID: 20330656 28. Swinburne, J.; Gerstenberg, C.; Breen, M.; Aldridge, V.; Lockhart, L.; Marti, E.; Antczak, D.; Eggleston-Stott, M.; Bailey, E.; Mickelson, J.; Roed, K.; Lindgren, G.; von Haeringen, W.; Guerin, G.; Bjarnason, J.; Allen, T.Binns, M. First comprehensive low-density horse linkage map based on two 3-generation, full-sibling, cross-bred horse reference families. Genomics. 66:123-34, 2000. ADDRESS: Animal Health Trust, Newmarket, CB8 7UU, United Kingdom. jswinbur@hgmp.mrcac.uk. Medline UID: 20318614 29. Ternovskaia, T. K. [The chromosomal localization of the major genes for the quantitative traits (QTL) of wheat by using D chromosome gene markers]. Tsitol Genet. 34:16-23, 2000. Medline UID: 20315187 30. Tocharoentanaphol, C.; Parinayok, R.; Punthuwattana, N.Kangwanpong, D. Fluorescence in situ hybridization: a rapid analysis to verify chromosome aberrations. J Med Assoc Thai. 83 Suppl 1:S76-81, 2000. ADDRESS: Department of Pathology, Faculty of Medicine, Srinakharinwirot University, Bangkok, Thailand. Medline UID: 20323732 31. Toivonen, H. T.; Onkamo, P.; Vasko, K.; Ollikainen, V.; Sevon, P.; Mannila, H.; Herr, M.Kere, J. Data mining applied to linkage disequilibrium mapping. Am J Hum Genet. 67:133-45, 2000. ADDRESS: Nokia Research Center and Rolf Nevanlinna Institute, University of Helsinki, Finland. Medline UID: 20307185 32. Uhlmann, V.; Prasad, M.; Silva, I.; Luettich, K.; Grande, L.; Alonso, L.; Thisted, M.; Pluzek, K. J.; Gorst, J.; Ring, M.; Sweeney, M.; Kenny, C.; Martin, C.; Russell, J.; Bermingham, N.; O'Donovan, M.; Sheils, O.O'Leary, J. J. Improved in situ detection method for telomeric tandem repeats in metaphase spreads and interphase nuclei. Mol Pathol. 53:48-50, 2000. ADDRESS: Department of Pathology, Coombe Women's Hospital, Dublin, Ireland. Medline UID: 20343336 33. van de Rijke, F. M.; Florijn, R. J.; Tanke, H. J.Raap, A. K. DNA fiber-FISH staining mechanism. J Histochem Cytochem. 48:743-5, 2000. ADDRESS: Departments of Molecular Cell Biology, Leiden University Medical Center, Leiden, The Netherlands. Medline UID: 20281622 34. van den Oord, E. J. Framework for identifying quantitative trait loci in association studies using structural equation modeling. Genet Epidemiol. 18:341-59, 2000. ADDRESS: Institute of Psychiatry, London, UK, and Utrecht University, Utrecht, The Netherlands. E.vandenOord@fss.uu.nl. Medline UID: 20259378 35. Vision, T. J.; Brown, D. G.; Shmoys, D. B.; Durrett, R. T.Tanksley, S. D. Selective mapping: a strategy for optimizing the construction of high-density linkage maps. Genetics. 155:407-20, 2000. ADDRESS: Department of Plant Breeding, Cornell University, Ithaca, New York 14853, USA. tv23@cornell.edu. Medline UID: 20253122 36. Zhu, X. and Elston, R. C. Power comparison of regression methods to test quantitative traits for association and linkage. Genet Epidemiol. 18:322-30, 2000. ADDRESS: Department of Epidemiology and Biostatistics, Case Western Reserve University, MetroHealth Medical Center, Cleveland, Ohio 44109-1998, USA. Medline UID: 20259376 **************************************************************************** ****************** Lyman/Margaret Crittenden Phone: 608-798-0791 8550 Highway 19 e-mail: crittend@itis.com Cross Plains, WI 53528-9300 USA **************************************************************************** ****************** ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -o U.S. PIG GENOME COORDINATION PROJECT - sponsored by USDA/CSREES -o WEB: http://www.genome.iastate.edu/pig