From crittend@itis.com Wed Aug 13 14:51:18 2003 Date: Sat, 12 Jul 2003 16:31:28 -0700 From: Lyman/Margaret Crittenden To: Multiple Recipients of Subject: July, 2003 Genomics references Resent-Date: 12 Jul 2003 21:31:02 -0000 Resent-From: angenmap@genome.ansci.iastate.edu Resent-cc: recipient list not shown: ; [ AnGenMap Discussion Mailing List - Mail distributed to 936 members ] [ INFO: http://www.genome.iastate.edu/community/discuss.html ] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ JOURNAL REFS. (GENOMICS METHODS AND REVIEWS) NLM 7/03 1. Azuaje, F. Clustering-based approaches to discovering and visualising microarray data patterns. Brief Bioinform. 4:31-42, 2003. ADDRESS: School of Computing and Mathematics, University of Ulster at Jordanstown, Newtownabbey, UK. fj.azuaje@ieee.org. Medline UID: 22601171 2. Broberg, P. Statistical methods for ranking differentially expressed genes. Genome Biol. 4:R41, 2003. ADDRESS: Molecular Sciences, AstraZeneca Research and Development Lund, S-221 87 Lund, Sweden. per.broberg@astrazeneca.com. Medline UID: 22686555 3. Brugmans, B.; van der Hulst, R. G.; Visser, R. G.; Lindhout, P.van Eck, H. J. A new and versatile method for the successful conversion of AFLP markers into simple single locus markers. Nucleic Acids Res. 31:e55, 2003. ADDRESS: Graduate School Experimental Plant Sciences, Laboratory of Plant Breeding, Department of Plant Sciences, Wageningen University, PO Box 386, 6700 AJ Wageningen, The Netherlands. bart.brugmans@wur.nl. Medline UID: 22622089 4. Chen, J. J.; Lee, S.; Zhou, G.; Rowley, J. D.Wang, S. M. Generation of longer cDNA fragments from SAGE tags for gene identification. Methods Mol Biol. 221:207-22, 2003. ADDRESS: Section of Hematology and Oncology, University of Chicago Medical Center, IL, USA. Medline UID: 22589251 5. Chen, X. Fluorescence polarization for single nucleotide polymorphism genotyping. Comb Chem High Throughput Screen. 6:213-23, 2003. ADDRESS: Virginia Institute for Psychiatric and Behavior Genetics, Department of Psychiatry, Commonwealth University, Richmond, Virginia 23298, USA. xchen@vcu.edu. Medline UID: 22565570 6. Dykxhoorn, D. M.; Novina, C. D.Sharp, P. A. Killing the messenger: short RNAs that silence gene expression. Nat Rev Mol Cell Biol. 4:457-67, 2003. ADDRESS: Center for Cancer Research, Massachusetts Institute of Technology, 40 Ames Street, E17-529, Cambridge, Massachusetts 02139, USA. Medline UID: 22662679 7. Kolbert, C. P.; Taylor, W. R.; Krajnik, K. L.O'Kane, D. J. Gene expression microarrays. Methods Mol Med. 85:239-55, 2003. ADDRESS: Mayo Clinic Cancer Center, Rochester, MN, USA. Medline UID: 22596683 8. Kraft, P.; Schadt, E.; Aten, J.Horvath, S. A family-based test for correlation between gene expression and trait values. Am J Hum Genet. 72:1323-30, 2003. ADDRESS: Department of Biostatistics, University of California at Los Angeles, Los Angeles, CA 90095-1772, USA. pkraft@ucla.edu. Medline UID: 22589969 9. Mouledous, L. and Gutstein, H. B. Gene arrays and proteomics. A primer. Methods Mol Med. 84:141-54, 2003. ADDRESS: Department of Anesthesiology and Molecular Genetics, University of Texas MD Anderson Cancer Center, Houston, TX, USA. Medline UID: 22589722 10. Nikiforov, T. T. and Simeonov, A. M. Application of fluorescence polarization to enzyme assays and single nucleotide polymorphism genotyping: some recent developments. Comb Chem High Throughput Screen. 6:201-12, 2003. ADDRESS: Caliper Technologies Corp., Mountain View, CA, USA. tnikiforov@qdots.com. Medline UID: 22565569 11. Rao, K. V.; Stevens, P. W.; Hall, J. G.; Lyamichev, V.; Neri, B. P.Kelso, D. M. Genotyping single nucleotide polymorphisms directly from genomic DNA by invasive cleavage reaction on microspheres. Nucleic Acids Res. 31:e66, 2003. ADDRESS: Department of Biomedical Engineering, Robert R. McCormick School of Engineering and Applied Science, Northwestern University, 2145 Sheridan Road, Evanston, IL 60208-3107, USA. Medline UID: 22656718 12. Wrobel, G.; Schlingemann, J.; Hummerich, L.; Kramer, H.; Lichter, P.Hahn, M. Optimization of high-density cDNA-microarray protocols by 'design of experiments'. Nucleic Acids Res. 31:e67, 2003. ADDRESS: Division of Molecular Genetics, Deutsches Krebsforschungszentrum, Im Neuenheimer Feld 280, D-69120 Heidelberg, Germany. Medline UID: 22684220 ********************************************************************** Margaret and Lyman Crittenden e-mail: crittend@itis.com 8550 Highway 19 Phone: 608-798-0791 Cross Plains, WI 53528 *********************************************************************** ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -o U.S. PIG GENOME COORDINATION PROJECT - sponsored by USDA/CSREES -o WEB: http://www.genome.iastate.edu/