Date | Topic | Handouts | Items Due | Other Useful Stuff |
---|---|---|---|---|
Sept. 3 | Intro Material Begin Mixed Model Example | Class Description ![]() Guide to Data Analysis ![]() Report Evaluation ![]() Report Outline ![]() Corn Yield Background ![]() Corn Yield Data Diagnostic Assignment ![]() | None | None |
Sept. 5 | Mixed Models | Diesel Problem Handout ![]() Diesel Data | Graph of corn yield data | ggplot() examples for corn data Baayen, Davidson, Bates 2008 paper on mixed models Bolker et al paper on mixed models |
Sept. 10 | Mixed model for corn example Diesel assignment | Assignment and table for diesel reports ![]() | Estimates of irrigation effects by variety with SEs from corn data List of several questions for the engineer who provided the diesel data A key graph of the diesel data. | |
Sept. 12 | Discussion of diesel assignment reports | Honeybee Assignment ![]() Honeybee Data | First diagnostic assignment | |
Sept. 17 | Visit by Fabrizzio Sanchez | Major Project 1 Background![]() Forest Data (Excel file) | Second diagnostic assignment | |
Sept. 19 | Discussion of honeybee study Discussion of questions for the first client | 10 or more questions for first client Third diagnostic assignment Honeybee assignment | ||
Sept. 24 | First visit by Kristen Michels | Example Calculations
Slides | ||
Sept. 26 | Discussion of diagnostic assignment | |||
Oct. 1 | Second visit by Kristen Michels | |||
Oct. 3 | Discussion of diagnostic assignment (continued) | |||
Oct. 8 | Karl Broman visit | First major assignment. | ||
Oct. 10 | Interferon Example | Interferon data (Excel spreadsheet)
Interferon data (text) Interferon assignment ![]() | ||
Oct. 15 | Interferon Presentations | Interferon assignment. | ||
Oct. 17 | First visit by Lauren Riters/Melissa Cordes | Major Project 2 background ![]() Major Project 2 (Starlings) data (Excel spreadsheet) | ||
Oct. 22 | Derr Communication Examples | 1.mov
2a.mov 2b.mov 3.mov 4a.mov 4b.mov 5.mov 6.mov 7.mov 8.mov 9.mov Biologist talks to Statistician Statistician talks to Biologist | ||
Oct. 24 | Second visit from Lauren Riters/Melissa Cordes | |||
Oct. 29 | Overview of first project analysis | Communication Assignment. | Model Report | |
Oct. 31 | Copepod group assignment | Copepod data
Copepod assignment ![]() | ||
Nov. 5 | Practice consulting with Copepod salinity project | Second Major Project | ||
Nov. 7 | Observe Nordheim in first consulting session | Copepod Group Assignment | ||
Nov. 12 | Discussion of Copepod Salinity Project | Nordheim write-up | ||
Nov. 14 | Masters Exam - NO CLASS | |||
Nov. 19 | Discussion of second project | Multiple comparisons assignment ![]() | ||
Nov. 21 | Discussion about papers on multiple testing and hypothesis testing | Curran-Everett Paper ![]() Tukey Paper ![]() Gelman et al. Paper ![]() | Multiple Comparisons assignment | Ethics assignment ![]() |
Nov. 26 | Ethics Discussion / Honor in Science Book | Ethics assignment | ||
Nov. 28 | Thanksgiving - NO CLASS | |||
Dec. 3 | Dave Demets presentation | |||
Dec. 5 | Kevin Buhr presentation | |||
Dec. 10 | Oral presentation of final projects | |||
Dec. 12 | Oral presentation of final projects |
Bret Larget, brlarget@wisc.edu